Characterization of PTM5 in aspen trees: a MADS-box gene expressed during woody vascular development.
Identifieur interne : 004478 ( Main/Exploration ); précédent : 004477; suivant : 004479Characterization of PTM5 in aspen trees: a MADS-box gene expressed during woody vascular development.
Auteurs : Leland J. Cseke [États-Unis] ; Jun Zheng ; Gopi K. PodilaSource :
- Gene [ 0378-1119 ] ; 2003.
Descripteurs français
- KwdFr :
- ADN complémentaire (composition chimique), ADN complémentaire (génétique), ARN messager (génétique), ARN messager (métabolisme), Alignement de séquences (MeSH), Analyse de séquence d'ADN (MeSH), Bois (MeSH), Clonage moléculaire (MeSH), Données de séquences moléculaires (MeSH), Hybridation in situ (MeSH), Phylogenèse (MeSH), Populus (croissance et développement), Populus (génétique), Protéines végétales (génétique), Protéines végétales (métabolisme), Protéines à domaine MADS (génétique), Régulation de l'expression des gènes au cours du développement (MeSH), Régulation de l'expression des gènes végétaux (MeSH), Saisons (MeSH), Similitude de séquences d'acides aminés (MeSH), Structures de plante (croissance et développement), Structures de plante (génétique), Séquence d'acides aminés (MeSH), Technique de Northern (MeSH).
- MESH :
- composition chimique : ADN complémentaire.
- croissance et développement : Populus, Structures de plante.
- génétique : ADN complémentaire, ARN messager, Populus, Protéines végétales, Protéines à domaine MADS, Structures de plante.
- métabolisme : ARN messager, Protéines végétales.
- Alignement de séquences, Analyse de séquence d'ADN, Bois, Clonage moléculaire, Données de séquences moléculaires, Hybridation in situ, Phylogenèse, Régulation de l'expression des gènes au cours du développement, Régulation de l'expression des gènes végétaux, Saisons, Similitude de séquences d'acides aminés, Séquence d'acides aminés, Technique de Northern.
English descriptors
- KwdEn :
- Amino Acid Sequence (MeSH), Blotting, Northern (MeSH), Cloning, Molecular (MeSH), DNA, Complementary (chemistry), DNA, Complementary (genetics), Gene Expression Regulation, Developmental (MeSH), Gene Expression Regulation, Plant (MeSH), In Situ Hybridization (MeSH), MADS Domain Proteins (genetics), Molecular Sequence Data (MeSH), Phylogeny (MeSH), Plant Proteins (genetics), Plant Proteins (metabolism), Plant Structures (genetics), Plant Structures (growth & development), Populus (genetics), Populus (growth & development), RNA, Messenger (genetics), RNA, Messenger (metabolism), Seasons (MeSH), Sequence Alignment (MeSH), Sequence Analysis, DNA (MeSH), Sequence Homology, Amino Acid (MeSH), Wood (MeSH).
- MESH :
- chemical , chemistry : DNA, Complementary.
- chemical , genetics : DNA, Complementary, MADS Domain Proteins, Plant Proteins, RNA, Messenger.
- chemical , metabolism : Plant Proteins, RNA, Messenger.
- genetics : Plant Structures, Populus.
- growth & development : Plant Structures, Populus.
- Amino Acid Sequence, Blotting, Northern, Cloning, Molecular, Gene Expression Regulation, Developmental, Gene Expression Regulation, Plant, In Situ Hybridization, Molecular Sequence Data, Phylogeny, Seasons, Sequence Alignment, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Wood.
Abstract
The vascular component of trees possesses some of the most specialized processes active in the formation of roots, stems, and branches, and its wood component continues to be of primary importance to our daily lives. The molecular mechanisms of wood development, however, remain poorly understood with few well-characterized regulatory genes. We have identified a vascular tissue-specific MADS-box gene, Populus tremuloides MADS-box 5 (PTM5) that is expressed in differentiating primary and secondary xylem and phloem. Phylogenetic analysis has shown that PTM5 is a member of the SOC1/TM3 class of MADS-box genes. Temporal expression analysis of PTM5 in staged vascular cambium and other tissues indicated that PTM5 expression is seasonal and is limited to spring wood formation and rapidly expanding floral catkins. Spatial expression analysis using in situ hybridization revealed that PTM5 expression is localized within a few layers of differentiating vascular cambium and xylem tissues as well as the vascular bundles of expanding catkins. Since many MADS-box genes are known to act as transcription factors, these results suggest that the coordinated expression of PTM5 with other vascular developmental genes may be a hallmark of the complex events that lead to the formation of the woody plant body.
DOI: 10.1016/s0378-1119(03)00765-0
PubMed: 14585498
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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in the formation of roots, stems, and branches, and its wood component continues to be of primary importance to our daily lives. The molecular mechanisms of wood development, however, remain poorly understood with few well-characterized regulatory genes. We have identified a vascular tissue-specific MADS-box gene, Populus tremuloides MADS-box 5 (PTM5) that is expressed in differentiating primary and secondary xylem and phloem. Phylogenetic analysis has shown that PTM5 is a member of the SOC1/TM3 class of MADS-box genes. Temporal expression analysis of PTM5 in staged vascular cambium and other tissues indicated that PTM5 expression is seasonal and is limited to spring wood formation and rapidly expanding floral catkins. Spatial expression analysis using in situ hybridization revealed that PTM5 expression is localized within a few layers of differentiating vascular cambium and xylem tissues as well as the vascular bundles of expanding catkins. Since many MADS-box genes are known to act as transcription factors, these results suggest that the coordinated expression of PTM5 with other vascular developmental genes may be a hallmark of the complex events that lead to the formation of the woody plant body.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">14585498</PMID><DateCompleted><Year>2004</Year><Month>01</Month><Day>20</Day></DateCompleted><DateRevised><Year>2019</Year><Month>07</Month><Day>08</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0378-1119</ISSN><JournalIssue CitedMedium="Print"><Volume>318</Volume><PubDate><Year>2003</Year><Month>Oct</Month><Day>30</Day></PubDate></JournalIssue><Title>Gene</Title><ISOAbbreviation>Gene</ISOAbbreviation></Journal><ArticleTitle>Characterization of PTM5 in aspen trees: a MADS-box gene expressed during woody vascular development.</ArticleTitle><Pagination><MedlinePgn>55-67</MedlinePgn></Pagination><Abstract><AbstractText>The vascular component of trees possesses some of the most specialized processes active in the formation of roots, stems, and branches, and its wood component continues to be of primary importance to our daily lives. The molecular mechanisms of wood development, however, remain poorly understood with few well-characterized regulatory genes. We have identified a vascular tissue-specific MADS-box gene, Populus tremuloides MADS-box 5 (PTM5) that is expressed in differentiating primary and secondary xylem and phloem. Phylogenetic analysis has shown that PTM5 is a member of the SOC1/TM3 class of MADS-box genes. Temporal expression analysis of PTM5 in staged vascular cambium and other tissues indicated that PTM5 expression is seasonal and is limited to spring wood formation and rapidly expanding floral catkins. Spatial expression analysis using in situ hybridization revealed that PTM5 expression is localized within a few layers of differentiating vascular cambium and xylem tissues as well as the vascular bundles of expanding catkins. Since many MADS-box genes are known to act as transcription factors, these results suggest that the coordinated expression of PTM5 with other vascular developmental genes may be a hallmark of the complex events that lead to the formation of the woody plant body.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Cseke</LastName><ForeName>Leland J</ForeName><Initials>LJ</Initials><AffiliationInfo><Affiliation>Department of Biological Sciences, The University of Alabama in Huntsville, 142 Wilson Hall, Huntsville, AL 35899, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zheng</LastName><ForeName>Jun</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Podila</LastName><ForeName>Gopi K</ForeName><Initials>GK</Initials></Author></AuthorList><Language>eng</Language><DataBankList CompleteYN="Y"><DataBank><DataBankName>GENBANK</DataBankName><AccessionNumberList><AccessionNumber>AF377868</AccessionNumber></AccessionNumberList></DataBank></DataBankList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>Netherlands</Country><MedlineTA>Gene</MedlineTA><NlmUniqueID>7706761</NlmUniqueID><ISSNLinking>0378-1119</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D018076">DNA, Complementary</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D026161">MADS Domain Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012333">RNA, 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Hybridization</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D026161" MajorTopicYN="N">MADS Domain Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018514" MajorTopicYN="N">Plant Structures</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012333" MajorTopicYN="N">RNA, Messenger</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012621" MajorTopicYN="N">Seasons</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016415" MajorTopicYN="N">Sequence Alignment</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017386" MajorTopicYN="N">Sequence Homology, Amino Acid</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014934" MajorTopicYN="N">Wood</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2003</Year><Month>10</Month><Day>31</Day><Hour>5</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2004</Year><Month>1</Month><Day>21</Day><Hour>5</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2003</Year><Month>10</Month><Day>31</Day><Hour>5</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">14585498</ArticleId><ArticleId IdType="pii">S0378111903007650</ArticleId><ArticleId IdType="doi">10.1016/s0378-1119(03)00765-0</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>États-Unis</li></country><region><li>Alabama</li></region></list><tree><noCountry><name sortKey="Podila, Gopi K" sort="Podila, Gopi K" uniqKey="Podila G" first="Gopi K" last="Podila">Gopi K. Podila</name><name sortKey="Zheng, Jun" sort="Zheng, Jun" uniqKey="Zheng J" first="Jun" last="Zheng">Jun Zheng</name></noCountry><country name="États-Unis"><region name="Alabama"><name sortKey="Cseke, Leland J" sort="Cseke, Leland J" uniqKey="Cseke L" first="Leland J" last="Cseke">Leland J. Cseke</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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